rs2131754 chr16:84823739 A>G

Sequence
atctttgattgtcttgagtgctgc[A/G]tcagctaagacaaaaaccacagag
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
CEBPG_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPG_HUMAN n/a 2.14 1.004.4·10-3 3.00 -1.54 Weak Discordant
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Motif analysis

CEBPG_HUMAN Weak Discordant
CEBPG_HUMAN pic

Genetic associations

GRASP nonsyndromic striae distensae (stretch marks)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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