rs2132853 chr8:100720120 T>G

Sequence
tctaataaaaatgaattcttcata[T/G]ttcgattatttgacatgtattcaa
ASB in cell types
22RV1 (prostate carcinoma) bipolar neuron IPSC-derived bipolar neuron
ASB for transcription factors
ANDR_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.98 -5.49 5.9·10-31.00 2.00 n/a No Hit
CTCF_HUMAN 0.75 0.91 0.600.04 1.31 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  infant head circumference,  total cholesterol,  triglycerides,  years of education
GTEx eQTL Heart_Left_Ventricle,  Skin_Not_Sun_Exposed_Suprapubic

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