rs2134537 chr6:54993208 C>T
- Sequence
ccaggtgaaaaggacccaaaactc[C/T]ggcaccatgaaaaatacagtatcg
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line) GM19240 (B cells Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi) GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.33 | 1.46 | 1.35 | n/a | No Hit | |||
| STAG1_HUMAN | -0.69 | 2.01 | 1.14 | n/a | n/a |
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