rs2134634 chr3:192597670 G>A
- Sequence
tgttgactgagaaagagaagaaaa[G/A]tcggagaaactggccactctgcat
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) T47D (invasive ductal carcinoma) MCF7 WS8 cells breast tumor
- ASB for transcription factors
- FOXA1_HUMAN GRHL2_HUMAN PRGR_HUMAN HIF3A_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.01 | 0.65 | 1.87 | n/a | No Hit | |||
| GRHL2_HUMAN | 1.34 | 0.05 | 2.12 | n/a | No Hit | |||
| PRGR_HUMAN | 0.43 | 1.34 | 3.60 | n/a | No Hit | |||
| HIF3A_HUMAN | n/a | 3.15 | 4.00 | n/a | No Hit |
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