rs2134848 chr17:74533123 T>C

Sequence
tacagcctaggaaagtaatcctgt[T/C]aggcaaaatcaggaagatgccctt
ASB in cell types
PANC1 (pancreatic ductal adenocarcinoma) bipolar neuron
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.61 1.34 1.000.01 1.21 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  advanced age-related macular degeneration (geographic atrophy),  body mass index (bmi)
GTEx eQTL Artery_Tibial,  Colon_Sigmoid,  Lung,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Whole_Blood

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