rs2135615 chr4:177393388 C>A

Sequence
tgtggtttgtggtgaactctttct[C/A]gtgatctttgttttcaagaatcct
ASB in cell types
Th1-cells CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
TBX21_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX21_HUMAN 1.71 -0.74 0.031.00 1.00 n/a No Hit
SMCA4_HUMAN 0.06 1.27 0.970.05 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP age at death with kuru exposure,  rheumatoid arthritis,  severe diabetic retinopathy

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