rs2135888 chr2:123080607 G>C
- Sequence
tgttctccattgtgttctatttat[G/C]tatagatctgtttctgtactgtca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- MEF2B_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | 3.00 | -2.74 | 1.00 | -6.18 | Concordant | |||
| STAG1_HUMAN | 2.15 | -1.95 | 1.00 | n/a | n/a |
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Motif analysis
