rs2136421 chr11:119729700 C>T
- Sequence
agttccgcccgggacggaacgtgg[C/T]atagctcgcaacagaacccagtct
- ASB in cell types
- MDA-MB-157 (triple negative breast carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| MDA-MB-157 (triple negative breast carcinoma) | 1.46 | -0.89 | 1.00 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | 0.77 | 0.78 | 1.01 |
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