rs2137831 chr1:48236776 T>C

Sequence
ggctgcctaatggattcctactgc[T/C]tgctcatctgtgcacccccagccc
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.88 1.22 0.947.5·10-4 1.13 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  hdl cholesterol change with statins,  major depressive disorder
GTEx eQTL Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Aorta,  Brain_Hypothalamus,  Breast_Mammary_Tissue,  Colon_Sigmoid,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Spleen,  Stomach,  Thyroid

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