rs2138606 chr2:112726864 T>G
- Sequence
ccagttaccccattctcctcagcc[T/G]cgcctgggctccacctgccttgtc
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) A549 (lung carcinoma) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 1.12 | 0.50 | 1.88 | n/a | n/a |
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