rs213935 chr7:117538154 A>G

Sequence
ctcgaaaaggctagaagtgttgac[A/G]taaatatgggacagcaagagttgc
ASB in cell types
HS-SY-2(Monophasic synovial sarcoma)
ASB for transcription factors
KDM2B_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM2B_HUMAN 1.98 -1.78 0.011.00 1.00 n/a n/a
SMCA4_HUMAN 1.62 -1.05 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP college completion hdl cholesterol total cholesterol triglycerides years of education
GTEx eQTL Brain_Caudate_basal_ganglia Brain_Hippocampus

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