rs2139494 chr2:76599857 C>G
- Sequence
acaatttgaggtgcttaggaagct[C/G]ttggccgctagttgctgctagaca
- ASB in cell types
- spleen MDA-MB-157 (triple negative breast carcinoma) heart left ventricle
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.33 | 0.42 | 1.22 | 1.02 | Weak Discordant |
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Motif analysis
