rs2140224 chr17:27473536 G>T
- Sequence
atccttgtgaggagcagcctgtag[G/T]gctggggtttgggcagcaggcagg
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.06 | 1.00 | 2.00 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | 0.85 | 0.63 | 1.02 |
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