rs2140472 chr7:145784690 T>C
- Sequence
gctctggccgggcgcggtggctca[T/C]gcctgtaatcccagcactttgtga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MNT_HUMAN SMCA4_HUMAN MITF_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | -0.15 | 1.58 | 1.50 | n/a | No Hit | |||
| SMCA4_HUMAN | -2.86 | 1.57 | 1.50 | n/a | n/a | |||
| MITF_HUMAN | -2.46 | 1.57 | 1.50 | n/a | No Hit | |||
| KDM1A_HUMAN | -1.02 | 1.62 | 1.50 | n/a | n/a |
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