rs2141855 chr12:104500929 G>A

Sequence
aggctctgatctctgtaggatcac[G/A]ggtgggagggcaggtttgatctct
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia) CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
CDK9_HUMAN SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CDK9_HUMAN -2.63 3.06 1.002.8·10-6 1.00 n/a n/a
SPI1_HUMAN -0.37 1.13 1.008.3·10-4 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  ldl cholesterol,  total cholesterol,  triglycerides,  years of education
GTEx eQTL Adrenal_Gland,  Cells_EBV-transformed_lymphocytes,  Heart_Left_Ventricle,  Stomach

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