rs2142462 chr7:7061462 G>C
- Sequence
aatagtattattatttctgatatc[G/C]gggcggggagggtgtgatattact
- ASB in cell types
- MCF10A (breast epithelial cells)
- ASB for transcription factors
- SATB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SATB1_HUMAN | 3.92 | n/a | 1.00 | 0.63 | Weak Discordant |
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Motif analysis
