rs2143508 chr20:24364688 A>G
- Sequence
acgtttatgtagcagctgccgtag[A/G]ttgtgatgatgagatcatcagata
- ASB in cell types
- MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.53 | 1.13 | 1.27 | n/a | No Hit | |||
| ESR1_HUMAN | -0.23 | 1.74 | 1.73 | n/a | No Hit |
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