rs2143549 chr20:51959212 G>A
- Sequence
atctggatctgtggtcttatctgc[G/A]gcatgctaatgctgcttcctgcag
- ASB in cell types
- HUVEC-C (HUVEC, umbilical vein endothelial cells) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- TF65_HUMAN FLI1_HUMAN NOTC1_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 3.25 | n/a | 2.00 | n/a | No Hit | |||
| FLI1_HUMAN | 2.45 | -2.56 | 1.17 | n/a | No Hit | |||
| NOTC1_HUMAN | 2.07 | n/a | 2.00 | n/a | n/a | |||
| ETS1_HUMAN | 1.77 | -1.28 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4