rs2144690 chr6:52724040 A>G

Sequence
tctttcacacagcacaattatttc[A/G]aaattcatctgtgcttttttatgt
ASB in cell types
LHSAR (prostate epithelial cells)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -0.68 1.71 1.001.3·10-4 1.57 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Artery_Tibial,  Brain_Cerebellum,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Nerve_Tibial,  Pituitary,  Testis,  Thyroid

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