rs2144691 chr6:52726197 C>T
- Sequence
ttcagttatacacacacacacaca[C/T]atatatatataaactcactattaa
- ASB in cell types
- LNCaP (prostate carcinoma) MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.90 | -0.12 | 1.64 | -0.54 | Weak Concordant |
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Motif analysis
