rs2144877 chr14:30503900 A>G
- Sequence
ggaagaaaataaactccgaagttc[A/G]aactgtgttcctgtatttgttagc
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.23 | 0.44 | 1.60 | -3.50 | Concordant | |||
| FOXA1_HUMAN | 1.61 | -0.27 | 1.46 | n/a | No Hit |
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Motif analysis
