rs2144905 chr20:44287463 C>A
- Sequence
ttccaatccccccaaagcccgccc[C/A]gaacaggatgtccttcagtgcttt
- ASB in cell types
- HepG2 (hepatoblastoma) breast tumor
- ASB for transcription factors
- ESR1_HUMAN ELF3_HUMAN TEAD3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.56 | -4.79 | 2.00 | 2.49 | Discordant | |||
| ELF3_HUMAN | 2.52 | -2.19 | 1.00 | n/a | No Hit | |||
| TEAD3_HUMAN | 1.67 | -1.44 | 1.00 | n/a | No Hit |
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Motif analysis
