rs2145441 chr20:57229790 C>T

Sequence
ctctcaggctgggttatggctgcc[C/T]ggttccaagtgggacagcaggacg
ASB in cell types
MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) n/a 2.11 1.000.05 2.50
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Motif analysis

No data available

Genetic associations

GRASP acute lung injury following major trauma,  hdl cholesterol change with statins,  parkinsons disease,  rheumatoid arthritis
GTEx eQTL Brain_Spinal_cord_cervical_c-1,  Brain_Substantia_nigra,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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