rs2146367 chr13:40047558 T>C
- Sequence
aaaaaagtttgtttttttcctcta[T/C]tctcacaccacaagcatcaacaca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12892 (female B-cells lymphoblastoid cell line) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN IKZF2_HUMAN RAD51_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.55 | 2.02 | 1.08 | n/a | n/a | |||
| IKZF2_HUMAN | -0.36 | 1.38 | 1.50 | n/a | n/a | |||
| RAD51_HUMAN | -1.31 | 1.31 | 1.00 | n/a | n/a |
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