rs2146547 chr10:110803425 T>A
- Sequence
gagatagtattctaacagagcttc[T/A]caagcttcagtgtgcatacagatc
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.51 | 1.69 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | -0.55 | 1.37 | 1.00 | n/a | n/a |
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