rs2147381 chr9:120572167 T>C

Sequence
ggatgcacacagctgggctaccta[T/C]gtggcatgaagcacagaggttaag
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
CREB1_HUMAN SUH_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN -1.25 1.78 1.004.6·10-3 1.11 n/a No Hit
SUH_HUMAN -2.34 2.45 1.000.03 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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