rs2148021 chr10:103515668 T>A
- Sequence
acaaatcaccacctagtgaaacat[T/A]tagctcagccatgaaagtgaaacc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma) breast tumour metastasis
- ASB for transcription factors
- CTCF_HUMAN ANDR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.32 | 0.13 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.95 | -1.22 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 1.98 | 0.14 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3