rs2150447 chr21:45355558 G>A

Sequence
actgtgagaaggaagtgcctgttc[G/A]agccaccagttctgcgcattctta
ASB in cell types
HS-SY-2(Monophasic synovial sarcoma)
ASB for transcription factors
SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.51 -0.39 0.051.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP major depressive disorder,  obesity with early age of onset (age >2),  parkinsons disease,  salmonella-induced pyroptosis,  total cholesterol
GTEx eQTL Breast_Mammary_Tissue,  Heart_Left_Ventricle,  Muscle_Skeletal

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