rs215374 chr12:47356480 T>C
- Sequence
ttcgagtgagaatggggaagcttc[T/C]ggtcacagatggctgatctaacat
- ASB in cell types
- CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line) EOL-1 (Acute myeloid leukemia)
- ASB for transcription factors
- STAT1_HUMAN SMRC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.88 | n/a | 3.00 | n/a | No Hit | |||
| SMRC1_HUMAN | 2.69 | -2.43 | 1.00 | n/a | n/a |
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