rs2154256 chr10:17585253 C>T
- Sequence
tacctcactgccaatttctgtatg[C/T]cacttccctttttttgtctataaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MDM(monocyte derived macrophages) monocyte-derived dendritic cells SUP-B15 (Childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.85 | -2.38 | 1.58 | -0.47 | Weak Concordant | |||
| IKZF2_HUMAN | -1.02 | 2.36 | 1.00 | n/a | n/a |
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Motif analysis
