rs2160339 chr2:149763560 G>A
- Sequence
tgttggcgtcctctaaaggaaggc[G/A]ttacgtcattactgacaaatggta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | -2.33 | 2.67 | 1.00 | 3.15 | Concordant |
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Motif analysis
