rs2160586 chr12:12439752 T>C
- Sequence
gtactgagcaatacctcagcagcg[T/C]gctcgggcagaggaggtgagtgca
- ASB in cell types
- CAR-T cells MCF10A (breast epithelial cells) JB6 (Human anaplastic large cell lymphoma) FaDu(Hypopharyngeal squamous cell carcinoma)
- ASB for transcription factors
- NCOA3_HUMAN TF65_HUMAN IRF4_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOA3_HUMAN | 3.21 | -2.88 | 1.00 | n/a | n/a | |||
| TF65_HUMAN | 1.34 | 0.26 | 2.00 | n/a | No Hit | |||
| IRF4_HUMAN | 1.89 | -0.72 | 1.20 | n/a | No Hit |
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