rs2161404 chr5:169701962 T>A
- Sequence
gatgtatatgtttggttgttttca[T/A]gggacaggatcaattcaattggag
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells lymphoblastoid cell line) A549 (lung carcinoma)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -0.23 | 2.44 | 1.25 | n/a | No Hit |
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