ADASTRA v6.1.0
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rs216154
chr16:15822132
T
>
C
Sequence
ggcacttatacctgagtccctcta[T/C]cttgggggcggggtcgtggcatct
ASB in cell types
LUHMES (lund human mesencephalic cells)
ASB for transcription factors
STAG1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN
1.42
-0.27
0.02
1.00
1.08
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol change with statins
,
parkinsons disease
,
systolic blood pressure (sbp)
,
total cholesterol change with statins
,
triglycerides
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Esophagus_Mucosa
,
Esophagus_Muscularis
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)