rs2162229 chr8:80138778 C>T
- Sequence
actggctctctgaacattgagaac[C/T]tgtggctcaccgcatcctcccctc
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) MOLT-4 (Adult T acute lymphoblastic leukemia) Th1-cells
- ASB for transcription factors
- CDK9_HUMAN TBX21_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | -1.56 | 1.93 | 1.50 | n/a | n/a | |||
| TBX21_HUMAN | -2.99 | 1.89 | 1.50 | n/a | No Hit | |||
| SMCA4_HUMAN | 0.03 | 1.24 | 1.00 | n/a | n/a |
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