rs2162679 chr12:102477481 C>T
- Sequence
tctccgcatggaaatcttccaccc[C/T]ctacatagcccaaaacactgggac
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.04 | 1.00 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, birth weight, endometriosis, fasting insulin, homa-b, homa-ir, ldl cholesterol change with statins, mitral annular calcium, schizophrenia