rs2164044 chr2:80529610 A>G
- Sequence
gttcacacaatgagtatgcttgct[A/G]aacttggatcccacaaaagattgc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- MEF2B_HUMAN SKIL_HUMAN IKZF2_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | 4.36 | -4.05 | 1.00 | -1.84 | Weak Concordant | |||
| SKIL_HUMAN | 3.05 | n/a | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.64 | -1.29 | 1.00 | n/a | n/a | |||
| TBX21_HUMAN | 2.17 | -2.16 | 1.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
