rs2166967 chr2:6988021 T>C

Sequence
aagtttaaaatgctgaaaaataag[T/C]gaactaatctgtttaactatattt
ASB in cell types
CHL-1 (Melanoma)
ASB for transcription factors
BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 2.04 0.35 6.0·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  birth weight
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Whole_Blood

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