rs2167033 chr3:101066209 A>C

Sequence
accaatgattcattgaccttggaa[A/C]tctggctagtagatgtctaataaa
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
TTC-1240 (Rhabdoid tumor of the kidney) -0.16 1.12 1.009.1·10-3 1.39
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  hdl cholesterol change with statins,  infant head circumference,  ldl cholesterol,  total cholesterol
GTEx eQTL Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Nucleus_accumbens_basal_ganglia,  Brain_Putamen_basal_ganglia,  Brain_Substantia_nigra

Download