rs2168188 chr15:101170781 A>G

Sequence
tctgtctggaacgcgcctcttctc[A/G]ctccctgagtcatcaataaatctg
ASB in cell types
BJ (fibroblasts)
ASB for transcription factors
P63_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
P63_HUMAN -2.24 2.36 1.000.02 1.00 3.09 Concordant
Items per page:
1 – 1 of 1

Motif analysis

P63_HUMAN Concordant
P63_HUMAN pic

Genetic associations

GRASP ldl cholesterol,  lp-pla2 activity,  neuroblastoma (brain cancer),  serum creatinine,  total cholesterol,  transmission distortion,  variant creutzfeldt-jakob disease
GTEx eQTL Breast_Mammary_Tissue

Download