rs2168435 chr3:132660221 C>T
- Sequence
caaggcaacatcgctggcctcctg[C/T]cctggacacttatcaccccggtgc
- ASB in cell types
- BEAS-2B (bronchial epithelium) 22RV1 (prostate carcinoma) HEK293 (embryonic kidney) MCF10A (breast epithelial cells)
- ASB for transcription factors
- HCFC1_HUMAN GCR_HUMAN ANDR_HUMAN TYY1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HCFC1_HUMAN | -2.41 | 2.72 | 1.00 | n/a | n/a | |||
| GCR_HUMAN | 1.00 | 1.26 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.95 | n/a | 2.00 | n/a | No Hit | |||
| TYY1_HUMAN | 1.98 | 0.61 | 1.60 | n/a | No Hit |
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