rs216857 chr12:5977770 C>T
- Sequence
ctgtagttccagctactcaggagg[C/T]tgagggggaggatcgtctgagcct
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SMCA4_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | -1.38 | 2.60 | 1.00 | n/a | n/a | |||
| ETS1_HUMAN | -0.31 | 1.90 | 1.00 | 1.31 | Weak Concordant |
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Motif analysis
