rs2169479 chr15:34342999 C>T
- Sequence
tacatttctcgccatgcctattta[C/T]accctgttttctctcctcaccttc
- ASB in cell types
- K562 (myelogenous leukemia) thymus-derived CD34- cells MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- BC11B_HUMAN ETV1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BC11B_HUMAN | 2.48 | n/a | 2.00 | n/a | n/a | |||
| ETV1_HUMAN | 1.85 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Muscle_Skeletal, Testis, Whole_Blood