rs2169878 chr15:85555086 T>C

Sequence
ctaagtttcagtgctaaaatatct[T/C]gtggccctgggtatgcaggattgc
ASB in cell types
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 1.51 -0.45 0.041.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  refractive error,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cerebellum,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Brain_Hippocampus,  Esophagus_Mucosa,  Lung,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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