rs2170402 chr2:182242758 A>G

Sequence
tttgaaatcaagactgcaacaatg[A/G]ctcctgccagggtttccagcctgc
ASB in cell types
D283 Med (medulloblastoma)
ASB for transcription factors
OTX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN 2.97 n/a 7.0·10-61.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  bipolar disorder,  cystatin c in serum,  hdl cholesterol,  homa-b,  microalbuminuria,  total cholesterol change with statins,  urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Nerve_Tibial

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