rs217836 chr5:37378985 G>C
- Sequence
cggcacctgtaatcccagctactc[G/C]ggaggctgaggcaggagaatcgct
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- ZN394_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN394_HUMAN | n/a | 2.93 | 3.00 | 5.61 | Concordant | |||
| CTCF_HUMAN | 0.94 | 0.22 | 1.59 | n/a | No Hit |
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Motif analysis
