rs218381 chr1:37177416 A>G
- Sequence
aaaggcccagagggaggaacttgc[A/G]ccttcataagagactcttggggct
- ASB in cell types
- HeLa (cervical adenocarcinoma) upper lobe of left lung MS-1 (Small cell lung carcinoma) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.23 | 0.95 | 1.44 | n/a | No Hit | |||
| STAG1_HUMAN | -0.23 | 1.27 | 1.00 | n/a | n/a |
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