rs220267 chr21:42063855 A>G
- Sequence
agcagccgtgtgcaccagcctccc[A/G]tgggtggagcagagcaaaccaccc
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) ICN12 (primary pre-B acute lymphomablastic leukemia) naive IgD+ B cells GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SPT5H_HUMAN FOXP1_HUMAN TFE2_HUMAN INT13_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPT5H_HUMAN | 2.35 | 0.65 | 2.00 | n/a | n/a | |||
| FOXP1_HUMAN | 2.41 | -1.50 | 2.00 | n/a | No Hit | |||
| TFE2_HUMAN | 1.74 | -2.76 | 1.50 | n/a | No Hit | |||
| INT13_HUMAN | -0.53 | 1.67 | 1.50 | n/a | n/a | |||
| COT1_HUMAN | -1.06 | 1.06 | 1.00 | n/a | No Hit |
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