rs221481 chr14:79632933 G>A

Sequence
tgtgttctatgtgtccgtcattaa[G/A]ttgggtattttacacacattatct
ASB in cell types
VCaP (prostate carcinoma) LNCaP (prostate carcinoma) LNCaP C4-2 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 0.20 1.70 1.002.0·10-9 2.22 n/a No Hit
FOXA1_HUMAN -0.04 2.07 1.004.8·10-3 1.71 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol rheumatoid arthritis waist hip ratio

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