rs224481 chr4:11440010 A>G

Sequence
tcaagctggctgatcagaaaaagg[A/G]gaagcctcagaaaggaagtgggat
ASB in cell types
THP-1 (acute monocytic leukemia) EOL-1 (Acute myeloid leukemia) monocytes from periferal blood
ASB for transcription factors
SPI1_HUMAN SMRC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN -0.04 1.48 1.001.1·10-9 1.63 4.58 Concordant
SMRC1_HUMAN -1.37 2.40 1.000.04 2.00 n/a n/a
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP arthritis including non-rheumatoid fasting blood glucose hdl cholesterol irritible bowel syndrome neuroblastoma (brain cancer) premature ovarian failure rheumatoid arthritis schizophrenia
GTEx eQTL Esophagus_Muscularis Testis Whole_Blood

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